Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_028860.1
Length=52392
Score E
Sequences producing significant alignments: (Bits) Value
seq7083 100 1e-16
seq1072 82.4 3e-11
>seq7083
Length=1548
Score = 100 bits (110), Expect = 1e-16
Identities = 64/70 (91%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 4059 CAGTAGCTCAATTGGTAGAGCAGCGGTTTCCAAAGCCGCTCGTTGGGGGTTCGAGTCCCT 4118
||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||
Sbjct 1284 CAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCCCT 1343
Query 4119 CCTGGCCTGC 4128
|||||| |||
Sbjct 1344 CCTGGCGTGC 1353
>seq1072
Length=16059
Score = 82.4 bits (90), Expect = 3e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 4056 GGTCAGTAGCTCAATTGGTAGAGCAGCGGTTTCCAAAGCCGCTCGTTGGGGGTTCGAGTC 4115
|| || ||||||||||||||||| | |||| |||||| ||| |||||||||||||| |
Sbjct 111 GGCCAATAGCTCAATTGGTAGAGTATCGGTCTCCAAAACCGAGGGTTGGGGGTTCGAGAC 170
Query 4116 CCTCCTGGCCTGC 4128
|||| ||||||||
Sbjct 171 CCTCTTGGCCTGC 183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 167508755483128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |