Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_028897.1
Length=49421
Score E
Sequences producing significant alignments: (Bits) Value
seq7083 89.7 2e-13
seq1072 82.4 2e-11
>seq7083
Length=1548
Score = 89.7 bits (98), Expect = 2e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 4136 GCCAGTAGCTCAACTGGTAGAGCAGCGGTCTCCAAAGCCGCGCGTTGGAGGTTCGAGTCC 4195
||||||||||||| ||| |||||||||||||||||| |||| ||||| |||||||||||
Sbjct 1282 GCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCC 1341
Query 4196 TCCCTGGCCTGC 4207
|||||| |||
Sbjct 1342 CTCCTGGCGTGC 1353
>seq1072
Length=16059
Score = 82.4 bits (90), Expect = 2e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 4135 GGCCAGTAGCTCAACTGGTAGAGCAGCGGTCTCCAAAGCCGCGCGTTGGAGGTTCGAGTC 4194
||||| |||||||| |||||||| | ||||||||||| ||| | ||||| |||||||| |
Sbjct 111 GGCCAATAGCTCAATTGGTAGAGTATCGGTCTCCAAAACCGAGGGTTGGGGGTTCGAGAC 170
Query 4195 CTCCCTGGCCTGCATACCACCCAGT 4219
| | |||||||| | ||||| ||
Sbjct 171 CCTCTTGGCCTGCCAAACACCCGGT 195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 158002919968356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |