Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_028931.1
Length=55108
Score E
Sequences producing significant alignments: (Bits) Value
seq4113 113 2e-20
>seq4113
Length=2865
Score = 113 bits (124), Expect = 2e-20
Identities = 131/177 (74%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 4342 CTGTGGGACGCTGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCATC 4401
|||||||| | ||||| ||||||| |||| |||||||| || | | | |||
Sbjct 223 CTGTGGGATGTGATCATGTCTTCCACCTACGACTTTGCCGAGCCAGGGTTTATCCTGATC 164
Query 4402 GACACCATCAACCGCATGAACAATCTCTGGTACTGCGAGGAGATTGCGGCCACCAACCCG 4461
||| | ||||| |||||||| ||||| |||||| | || ||||||||||||
Sbjct 163 GACCGCGTCAACGAAATGAACAACAACTGGTTCTGCGAAAACATCCGCGCCACCAACCCG 104
Query 4462 TGCGGCGAGCAGCCGCTGCCTCCGTTCGGCGCCTGCCTGCTTGGCTCCTTCAACCTG 4518
|| || ||||| || ||||| || | ||||||||||||||| || ||| ||||||||
Sbjct 103 TGTGGTGAGCAACCACTGCCACCTTACGGCGCCTGCCTGCTGGGTTCCGTCAACCTG 47
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 176198708111240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |