Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq4113 113 2e-20 >seq4113 Length=2865 Score = 113 bits (124), Expect = 2e-20 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 4342 CTGTGGGACGCTGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCATC 4401 |||||||| | ||||| ||||||| |||| |||||||| || | | | ||| Sbjct 223 CTGTGGGATGTGATCATGTCTTCCACCTACGACTTTGCCGAGCCAGGGTTTATCCTGATC 164 Query 4402 GACACCATCAACCGCATGAACAATCTCTGGTACTGCGAGGAGATTGCGGCCACCAACCCG 4461 ||| | ||||| |||||||| ||||| |||||| | || |||||||||||| Sbjct 163 GACCGCGTCAACGAAATGAACAACAACTGGTTCTGCGAAAACATCCGCGCCACCAACCCG 104 Query 4462 TGCGGCGAGCAGCCGCTGCCTCCGTTCGGCGCCTGCCTGCTTGGCTCCTTCAACCTG 4518 || || ||||| || ||||| || | ||||||||||||||| || ||| |||||||| Sbjct 103 TGTGGTGAGCAACCACTGCCACCTTACGGCGCCTGCCTGCTGGGTTCCGTCAACCTG 47 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176198708111240