Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_029121.1 Length=151417 Score E Sequences producing significant alignments: (Bits) Value seq413 89.7 5e-13 >seq413 Length=60602 Score = 89.7 bits (98), Expect = 5e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 125409 TGCAAGATGTATCAACGATCAGCAGACGTATTTTTAGGAGTACCATTCAATATCGCAAGC 125468 ||| ||||||| || || ||||| ||| | | || || |||||||||||||| ||| Sbjct 14087 TGCCAGATGTACCAGCGCTCAGCTGACATGGGGCTCGGCGTCCCATTCAATATCGCCAGC 14028 Query 125469 TACGCACTATTGACTCACCTTATCGCAAAGATGACAGGGTTAAAACCCGGAAAATTCATT 125528 ||||| || | || | | | | ||| || || |||| || |||||||| | || ||| Sbjct 14027 TACGCGCTGCTAACGCGCTTAGTGGCACAGGTGGCAGGTTTGAAACCCGGCGAGTTTATT 13968 Query 125529 CATACCTTTGGTGACGCTCATATCTATAACAACCACATTGAA 125570 ||| | |||||||||| ||| | ||| |||||| | ||| Sbjct 13967 CATGTCATTGGTGACGCGCATGTGTATCTGAACCACGTGGAA 13926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484333218303120