Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_029121.1
Length=151417
Score E
Sequences producing significant alignments: (Bits) Value
seq413 89.7 5e-13
>seq413
Length=60602
Score = 89.7 bits (98), Expect = 5e-13
Identities = 117/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 125409 TGCAAGATGTATCAACGATCAGCAGACGTATTTTTAGGAGTACCATTCAATATCGCAAGC 125468
||| ||||||| || || ||||| ||| | | || || |||||||||||||| |||
Sbjct 14087 TGCCAGATGTACCAGCGCTCAGCTGACATGGGGCTCGGCGTCCCATTCAATATCGCCAGC 14028
Query 125469 TACGCACTATTGACTCACCTTATCGCAAAGATGACAGGGTTAAAACCCGGAAAATTCATT 125528
||||| || | || | | | | ||| || || |||| || |||||||| | || |||
Sbjct 14027 TACGCGCTGCTAACGCGCTTAGTGGCACAGGTGGCAGGTTTGAAACCCGGCGAGTTTATT 13968
Query 125529 CATACCTTTGGTGACGCTCATATCTATAACAACCACATTGAA 125570
||| | |||||||||| ||| | ||| |||||| | |||
Sbjct 13967 CATGTCATTGGTGACGCGCATGTGTATCTGAACCACGTGGAA 13926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 484333218303120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |