Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq5730 84.2 1e-11 >seq5730 Length=1907 Score = 84.2 bits (92), Expect = 1e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 45315 GTGGCGCTGATGCCGGATGCTCACAGCGGCAAGGGGTCCGCGGTCGGCACTGTGATCCCG 45374 |||||| ||||||| || | ||| |||||||| | | || ||| | ||||||||| Sbjct 1497 GTGGCGGTGATGCCCGACGTGCACCTGGGCAAGGGCGCAACCGTGGGCTCGGTGATCCCG 1438 Query 45375 ACCGTCGATGCGGTGATCCCCGCGGCGGTCGGCGTCGACATCGGCTGCGGCATG 45428 ||| || ||| | ||||| || ||||| ||||| || ||||||||||||||| Sbjct 1437 ACCCGCGGTGCCATCATCCCGGCCGCGGTTGGCGTGGATATCGGCTGCGGCATG 1384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299277510489548