Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq8929 125 1e-23 >seq8929 Length=1248 Score = 125 bits (138), Expect = 1e-23 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 99242 CAGATGCGTTTCAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAG-CGCTGTCACAT 99300 |||||||| ||| |||| | |||||||||||||| || || ||| |||| || | Sbjct 906 CAGATGCGCTTCGATCTCACTGCCGGCTTTCCGCTGGTCACCACCAAGAAGCTG-CATCT 964 Query 99301 GCGTTCGATTATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTT 99360 ||| ||||| || ||||| ||||||||||| ||| | ||||||||||| || ||| | Sbjct 965 GCGCTCGATCATCCACGAGCTGCTGTGGTTTCTGCAGGGCGATACCAACATCGGGTATCT 1024 Query 99361 AAATGATAATGGTGTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACC 99420 || || || || ||| |||||||||||| || | |||||||||| || || Sbjct 1025 GAAAGACAACCAGGTGCGTATCTGGGACGAATGGGCCGACGACAATGGCGACCTTGGCCC 1084 Query 99421 GGTATACGGTAAACAGTGGCGGTCTTGG 99448 ||| ||||| || ||||||||| |||| Sbjct 1085 GGTGTACGGCAAGCAGTGGCGGCGTTGG 1112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716355760201200