Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq4167 98.7 1e-15 >seq4167 Length=2817 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 136355 CGTTTCTATGATGCAGTTTCTACTAAAAAGATTTCATTGCCAACACCAATTATGTCTGGT 136414 |||||||| ||||| ||||| || |||||||| |||| || || || ||||| ||| Sbjct 137 CGTTTCTACGATGCCGTTTCCACGTTCAAGATTTCCCTGCCTACCCCTATCATGTCCGGT 78 Query 136415 GTTCGTACTCCAACCCGCCAGTTCAGTTCATGCGTAGTTATTGAAGGTGGTGATAGTCT 136473 || ||||| || || ||||||||||| || |||||| | ||||| |||| ||||| || Sbjct 77 GTGCGTACACCTACACGCCAGTTCAGCTCCTGCGTATTGATTGAGTGTGGCGATAGCCT 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539816034970080