Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq8929 113 7e-20 >seq8929 Length=1248 Score = 113 bits (124), Expect = 7e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 200137 CAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTC 200196 |||||||||||| |||| | |||||| || |||| || ||||||||| ||||| Sbjct 906 CAGATGCGCTTCGATCTCACTGCCGGCTTTCCGCTGGTCACCACCAAGAAGCTGCATCTG 965 Query 200197 CGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTG 200256 || || ||||| ||||||||| ||||||| || | || || ||||| ||| ||||||| Sbjct 966 CGCTCGATCATCCACGAGCTGCTGTGGTTTCTGCAGGGCGATACCAACATCGGGTATCTG 1025 Query 200257 AACGATAACAATGTCACCATTTGGGACGAATGGGC 200291 || || ||| | || || |||||||||||||| Sbjct 1026 AAAGACAACCAGGTGCGTATCTGGGACGAATGGGC 1060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783241653888000