Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq19842 86.0 6e-12 >seq19842 Length=884 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 16190 TTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTG 16249 ||| |||| | ||| |||||||| || || || || || || | ||||||||| |||||| Sbjct 230 TTATACATCAAACAGGCGAAGTCACAGTGAAGGCCCTCATCCCGGCTGATAAGCTCGTTG 171 Query 16250 GAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGC-AAATGA 16308 ||||| | |||||||| || || ||||| | |||||| || | ||| ||| || Sbjct 170 GAAAAGCAGAGTCCTGGCATGAGACCACGCTTCTTGAGCCAGAAGAT-GGAGCAAAAGGA 112 Query 16309 CCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 || || || || || |||||||| | ||||| || Sbjct 111 TCCAGAGAAAAAGATGCCCTCAACTGCAGCAAAGGC 76 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509419992515560