Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11-
01] 311,983 sequences; 85,142,588 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq205478 114 1e-20
seq19842 93.3 4e-14
>seq205478
Length=785
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40717 GGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAA 40776
||||| |||||||| |||| || || | | |||| | | | | | ||| ||||
Sbjct 516 GGCAAGACCATCACTCTCGATGTGGAGCCTTCGGACACCATCGAGAATGTGAAGCAAAAG 457
Query 40777 ATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAG 40836
|||| ||||| |||||||| || | |||||||| || ||||||| ||| ||||| |||
Sbjct 456 ATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATCTTCGCTGGCAAGCAG 397
Query 40837 CTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTA 40896
|| || || | ||||| ||| |||||| ||||||||||||||| ||| || || ||
Sbjct 396 CTTGAAGATGGCCGCACTCTCTCCGACTATAACATCCAGAAGGAGAGCACTCTCCACCTC 337
Query 40897 GTGTTGCGCTTGAGGGGCGGCGG 40919
|| | ||| | | || |||||
Sbjct 336 GTTCTCCGCCTCCGTGGTGGCGG 314
>seq19842
Length=884
Score = 93.3 bits (102), Expect = 4e-14
Identities = 117/159 (74%), Gaps = 4/159 (3%)
Strand=Plus/Plus
Query 117041 CTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTT 117100
|| || ||||| || || || |||||| |||| || || || || | |||| ||
Sbjct 70 CTTGTAGCCTTTGCTGCAGTTGAGGGCATCTTTTTCTCTGGATCCTTTTGCTCCATCTTC 129
Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGG--CCTGACTTTCAGCAACGAGCTCATCTCCA 117158
||||||||||| || || |||||||| || ||| |||| ||||||||| ||| |
Sbjct 130 TGGCTCAAGAAGCGTGGTCTCATGCCAGGACTCTGCTTTTC--CAACGAGCTTATCAGCC 187
Query 117159 GGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGT 117197
|||| ||||| || || || ||||| ||||||||| |||
Sbjct 188 GGGATGAGGGCCTTCACTGTGACTTCGCCTGTTTGATGT 226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 513209954604080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |