Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq12515 113 3e-20 >seq12515 Length=817 Score = 113 bits (124), Expect = 3e-20 Identities = 171/243 (70%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 97033 AGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGA 97092 || ||||| |||| | || ||||| | || ||| | ||| ||||| || | | |||| Sbjct 272 AGTTGCTCCCTGAGTGGTTCTATGTGGTCCATATAGACGTGCGCATCACCAATAACGTGA 213 Query 97093 ATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCAT----ACAAGTTAATAGAGA 97148 | ||| || ||||| || ||| ||| || || | || ||||| | || Sbjct 212 ACAAAGTCGCCAGGTTTCAAGTCACAGACTTGCGCTACCAGCCTCACAAGCAACGAG--- 156 Query 97149 ATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTG 97208 |||||||||||||| || ||||| || || |||||||| |||||||| ||||| | ||| Sbjct 155 -TAGCTAGCAATGTTGAAGGGCACACCGAGGCCCATATCCGCTGATCTCTGATACATCTG 97 Query 97209 ACAGGAAAGCTTTCCATCACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 ||||| |||| ||| || |||||| ||||||| || | ||| || || || | || Sbjct 96 GCAGGAGAGCTCTCCGTCTGCCACATAGAACTGACAGAACATATGGCACGGTGGGAGTGC 37 Query 97269 CAT 97271 ||| Sbjct 36 CAT 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345465425689310