Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq205478 95.1 8e-15 seq14360 82.4 5e-11 >seq205478 Length=785 Score = 95.1 bits (104), Expect = 8e-15 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || || ||||| ||||| |||||||| || ||| | || Sbjct 332 AGAACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCT 391 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| ||||||||||| || | || ||||||||| Sbjct 392 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 451 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||||||||| | || | || | || | | || || || | |||||||| Sbjct 452 TGAATCTTTTGCTTCACATTCTCGATGGTGTCCGAAGGCTCCACATCGAGAGTGATGGTC 511 Query 34358 TTGCC 34362 ||||| Sbjct 512 TTGCC 516 >seq14360 Length=163 Score = 82.4 bits (90), Expect = 5e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||| || ||||| | || || || ||||| ||||| ||||| || || ||| | || Sbjct 41 CAGGACAAGGTGAAGGGTGCTCTCCTTCTGAATGTTATAGTCAGAGAGAGTGCGGCCATC 100 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| ||||||||| ||||| ||||| ||||||||||| || | || ||||||||| Sbjct 101 CTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTC 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321843585656480