Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq12515 125 6e-24 >seq12515 Length=817 Score = 125 bits (138), Expect = 6e-24 Identities = 180/254 (71%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 || || || | ||||| | || ||||| || ||||| | ||| |||||||| || Sbjct 260 AGTGGTTCTATGTGGTCCATATAGACGTGCGCATCACCAATAACGTGAACAAAGTCGCCA 201 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || ||| | | ||| || || | ||| | || | | |||||| || ||||| Sbjct 200 GGTTTCAAGTCACAGACTTGCGCTACCAGCCTCACAAGCAACGAGTAGCTAGCAATGTTG 141 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCC 21104 || || || ||||||||||| || || || ||||| |||| ||||||||| ||||| || Sbjct 140 AAGGGCACACCGAGGCCCATATCCGCTGATCTCTGATACATCTGGCAGGAGAGCTCTCCG 81 Query 21105 CGAGCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCC 21164 ||||| || |||||||| || | || || || ||||| |||||| ||| ||| || Sbjct 80 TCTGCCACATAGAACTGACAGAACATATGGCACGGTGGGAGTGCCATCTGCGAGAGATCT 21 Query 21165 GCGGGGTTCCACGC 21178 || |||||||| || Sbjct 20 GCTGGGTTCCAAGC 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426149470389840