Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq19842 93.3 6e-14 >seq19842 Length=884 Score = 93.3 bits (102), Expect = 6e-14 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 125415 TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTC-GGGTAGTTT 125473 || || || || || || || || || || || ||||||||||| || || || | ||| Sbjct 58 TATGCTGAAAGGCTTGTAGCCTTTGCTGCAGTTGAGGGCATCTTTTTCTCTGGATCCTTT 117 Query 125474 TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGA 125533 ||| ||||||| |||||||||||||| || |||||||| ||||| ||||| Sbjct 118 TGC-TCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCAGGACTCTGCTTTTCCAACGA 176 Query 125534 GTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | |||| || || |||||||| ||||||||||| ||| Sbjct 177 GCTTATCAGCCGGGATGAGGGCCTTCACTGTGACTTCGCC 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738169226595080