Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq131199 105 2e-17 >seq131199 Length=545 Score = 105 bits (116), Expect = 2e-17 Identities = 187/264 (71%), Gaps = 8/264 (3%) Strand=Plus/Plus Query 325322 ATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCC-CTC 325380 || || || ||||| || ||||| || ||| | || || ||||||||| || || Sbjct 286 ATGTAACGAGCACTGGCAGCGTCCTTGCCGCCCATAAGTCGCGTACCGAACTGACCGCTT 345 Query 325381 CGGCAACAACCAG-TTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGG 325439 || || | || |||||||| |||||||| ||||| | ||| || | ||||| |||| Sbjct 346 GGG--ACGAGGAGGTTGATGTTGTTGCTTCCAACATAGTTCTGAGCCATATTCACTATGG 403 Query 325440 TCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACC-GCTG 325498 | | || ||| || |||||||||||||| || ||||| | || || || ||| Sbjct 404 TACTATGTAGACTGGCCTCGCCATGGTGATAAGCAGAGTGCTCGGACACATAGCCAGCT- 462 Query 325499 AACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATATATCACTTT 325557 ||||||| | | ||| ||| || | | || | |||| |||| | || | | ||||| Sbjct 463 AACTGTGAGATCCGCACCTCGTTCTTAAGTTTTCTCTTG-AAGCAGCAAAACAAGACTTT 521 Query 325558 CCGTTGAGAAGGTTTGAAACCATC 325581 |||||||||||| ||||| ||||| Sbjct 522 CCGTTGAGAAGGCTTGAATCCATC 545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174938988479474