Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq8846 118 1e-21 seq19842 104 3e-17 seq131199 86.0 7e-12 >seq8846 Length=717 Score = 118 bits (130), Expect = 1e-21 Identities = 440/681 (65%), Gaps = 24/681 (4%) Strand=Plus/Plus Query 114346 GGTCTCCACG---GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 114402 || ||||||| || ||| | || | ||||| ||| | || || || | || || || Sbjct 12 GGCCTCCACGACAGGGTAATAGTTGATGTCGATGACCTTGTTAAGGTTCCTTGTCACTAC 71 Query 114403 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTT 114462 ||| | ||| || | || || || |||| | | || || || | || ||| | Sbjct 72 CTTGGAGATCTCCTTGAGGTTATCAAAATCGTAGGTCCGTGTATCGTTGTTTACAAAGGA 131 Query 114463 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 114522 | ||| ||| || || || || ||||||| | ||| || |||||||||| || Sbjct 132 CGCGAGGTTGATAGAAGCAAGGTTGCACACAGCGACCTCGTCAGGGGCAGTGTACTCGAT 191 Query 114523 AATTTCCGTACACAAATT--TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 114580 || || || || | ||| || | | | ||||| |||| |||| |||||| || || Sbjct 192 GATCTCTGTGCAAAGATTGCTGGATT--TGATGGTCCCCAGATTCTGTTGATTAGATTTC 249 Query 114581 GTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGA 114640 ||| || |||||||| |||||||| || || || ||||| | ||||| | || Sbjct 250 CGGTTGCAGTGGTCCTTGTACAGCATGTAAGGGGTGCCAGTCTCAATCTGGGAATCTAGG 309 Query 114641 ATAGCCTTCCAGACATCGGCGGCTG-GCA--CAGTGGCGTTGGCTCGCC---CCTCCTC- 114693 || || ||||| || |||| || || | || || ||| ||| ||| Sbjct 310 ATCGCAAACCAGA-----GCTGCTGAGCCTTCACCACCCTT--CTTGCCTTTCCTTCTCT 362 Query 114694 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 114753 ||| ||||| || || || |||||||| || ||| | || | | |||| | Sbjct 363 CTCATACTTCTCATAAAGAGCCTCAAACTCGTCTCCCCACACGTCAGGTAACCCTCGGCA 422 Query 114754 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTC 114813 || | |||||||| |||||||| | || | | | || || |||||||||||||| Sbjct 423 CTCGTTAGGGCAGAACAGAGACCACTCGCCGTTCGCTTGTACGCGTTTCATGAAGAGGTC 482 Query 114814 TGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 114873 ||| ||||| | ||| |||| | ||| | |||| ||||| || ||||| Sbjct 483 TGGAATCCACATAGCGTAGAATAAATCTCTGGCGCGATGAAGTTCATTGCCATGATTCTT 542 Query 114874 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 114933 ||| |||||||| || | || || || ||||| || || ||||||| || | ||| Sbjct 543 TTTCAAGTCCAAAAACTCGAATATGTCGGCATGCCAAGGCTCAAGGTACATAGCAAATGA 602 Query 114934 CCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAG 114990 ||||| || | ||| |||| | ||| || || || || | || || || | || Sbjct 603 GCCCTTGCGCTTGCCTCCACCCTGATCTACGTATCTAGCAGTATCGTTGAAGACCCTCAG 662 Query 114991 CATTGGAATGATACCATCAGA 115011 ||| || | || |||| ||| Sbjct 663 CATAGGGACAATGCCATTAGA 683 >seq19842 Length=884 Score = 104 bits (114), Expect = 3e-17 Identities = 288/429 (67%), Gaps = 12/429 (3%) Strand=Plus/Minus Query 125752 CTTGCCGTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATAT- 125810 |||| |||| ||||| || | |||||| |||||||| ||||| || | ||| || || Sbjct 510 CTTGGCGTACTCCCCTACTCTCTTCTCAAAGAAGTTGGTCTTGCCTTG-AAGA-GAAATC 453 Query 125811 -TCTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGG-CACCCCA-ATCTGTT 125867 | ||||| | || || ||||| ||| | | | | | || || |||| | | Sbjct 452 ATGTCCATCCAGTCGAAAGGGTTGCTTGCCTGGTAGAGTTTAGGGCAGCCCAGAGCACC- 394 Query 125868 TGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGA 125927 ||| || | || | |||| |||||||||||| ||||| ||||||||||| || | Sbjct 393 -GAGCAGCCTGTCAGCGACGAACTCAATGTACTGGCACATCAGGTCAGAGTTCATGCCAA 335 Query 125928 TGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCA 125987 |||| | | || | || ||| || |||| | || || || | ||||| || | Sbjct 334 TGAGCTCAACAGGCAAAGCATCCTTGACGAACTCTTTTTCGATGGCGACGGCGTCTGCAA 275 Query 125988 CGATGGCGTGAATGGTGTCCACCC-CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC- 126045 || | ||||| |||| ||| | | ||| | |||| | | | || Sbjct 274 TAATAGTCTGAATTCTGTCATTGGGCAGCT-TGTTGACTAGCTTCTTATACA-TCAAACA 217 Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 ||| || || ||| || ||||| || ||| ||| || || || || ||||| ||||| Sbjct 216 GGCGAAGTCACAGTGAAGGCCCTCATCCCGGCTGATAAGCTCGTTGGAAAAGCAGAGTCC 157 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||||||| |||||||| | |||||| || | ||||| || || ||||| ||||| Sbjct 156 TGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGCAAAAGGATCCAGAGAAAAAGAT 97 Query 126166 TCCCTCCAC 126174 ||||| || Sbjct 96 GCCCTCAAC 88 >seq131199 Length=545 Score = 86.0 bits (94), Expect = 7e-12 Identities = 269/416 (65%), Gaps = 8/416 (2%) Strand=Plus/Plus Query 171728 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 171787 ||||| ||||| || ||| ||||||| || || ||| || | |||| | || | Sbjct 127 CCTGTTCCAATGCCATCGCTGCCGTTGACAAGGGCCAGAGGGATGATTGGTACGTACCAC 186 Query 171788 TCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCGGA 171847 | || ||||| | ||||| |||||||| ||||| || || |||||||| | | Sbjct 187 ACAGGCTCAATTCTTTGTCCATCCTCATCCAAGTAGTTCAGAACAGGGTCGTCATCTGCA 246 Query 171848 TCAAAGATTTTACGAGCATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGACGCA 171907 | ||||| | ||| | | || || || ||||||||||| | | | || Sbjct 247 TGGAAGATATGACGGGTAATGTTCTCCAGCTTGGTGAAGATGTAACGAGCACTGGCAGCG 306 Query 171908 TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATTG 171967 || ||||| ||||| || ||||| || || ||||| | || | ||||| ||||| ||| Sbjct 307 TCCTTGCCGCCCATAAGTCGCGTACCGAACTGACCGCTTGGGACGAGGAGGTTGATGTTG 366 Query 171968 TTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACT----TC 172023 || || | |||| | |||| || || || ||| | | | ||||| || Sbjct 367 TTGCTTCCAACATAGTTCTGAGCCATATTCACTATGGTA----CTATGTAGACTGGCCTC 422 Query 172024 ACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATCTC 172083 || || || || || || | || | ||||| | || ||||||| | | || ||| Sbjct 423 GCCATGGTGATAAGCAGAGTGCTCGGACACATAGCCAGCTAACTGTGAGATCCGCACCTC 482 Query 172084 ATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGA 172139 | ||| || || | | |||||| | ||| ||| || | || |||||||||| Sbjct 483 GTTCTTAAGTTTTCTCTTGAAGCAGCAAAACAAGACTTTCCGTTGAGAAGGCTTGA 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595024047897640