Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq8846 201 1e-46 seq66070 127 2e-24 >seq8846 Length=717 Score = 201 bits (222), Expect = 1e-46 Identities = 394/577 (68%), Gaps = 4/577 (1%) Strand=Plus/Minus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 ||||||||||| || ||||| || ||||| || ||| | ||||||||||| |||||||| Sbjct 710 TCCTACATCCGTGGCACCAACGGAACCTCTAATGGCATTGTCCCTATGCTGAGGGTCTTC 651 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 ||| | | || | ||||| || |||||||| || | | | ||||| || || || | Sbjct 650 AACGATACTGCTAGATACGTAGATCAGGGTGGAGGCAAGCGCAAGGGCTCATTTGCTATG 591 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 || || ||||| ||||| || ||| | | || | ||| || |||||| || ||| Sbjct 590 TACCTTGAGCCTTGGCATGCCGACATATTCGAGTTTTTGGACTTGAAAAAGAATCATGGC 531 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || || | | |||||||| | ||||||||| | ||| | |||||||| || ||| Sbjct 530 AATGAACTTCATCGCGCCAGAGATTTATTCTACGCTATGTGGATTCCAGACCTCTTCATG 471 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 |||||||| | ||| || ||| ||| || || || || || || | || | Sbjct 470 AAACGCGTACAAGCGAACGGCGAGTGGTCTCTGTTCTGCCCTAACGAGTGCCGAGGGTTA 411 Query 94369 TCCGACGTTTGTGGA-TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427 | ||||| || ||| || | ||||| | | |||| || || | || || Sbjct 410 CCTGACGTGTGGGGAGACGAG-TTTGAGGCTCTTTATGAGAAGTATGAGAGAGAAGGAAA 352 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 ||| || | ||| || | ||| | |||| ||| | |||| | || ||| | || Sbjct 351 GGCAAGAAGGGTGGTGAAGGCTCAGCAGCTCTGGTTTGCGATCCTAGATTCCCAGATTGA 292 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 ||| || || || ||||| ||| |||||| | ||| |||| || || || || ||| Sbjct 291 GACTGGCACCCCTTACATGCTGTACAAGGACCACTG-CAACCGGAAATCTAATCAACAGA 233 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 | || ||| ||||| | ||||| ||||| ||||| ||||||| ||| | || | Sbjct 232 ATCTGGGGACCATCAAATCCAGCAATCTTTGCACAGAGATCATCGAGTACACTGCCCCTG 173 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCT 94643 ||||| | |||||||| ||||| | || |||||||| Sbjct 172 ACGAGGTCGCTGTGTGCAACCTTGCTTCTATCAACCT 136 >seq66070 Length=901 Score = 127 bits (140), Expect = 2e-24 Identities = 296/453 (65%), Gaps = 0/453 (0%) Strand=Plus/Minus Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || || ||||| ||||| || || || |||||| |||| ||||| ||||| |||| || Sbjct 772 GCACCTATGCCGACGGCTTCAACCGCCCAGATCATTGGTAACAATGAGTCCGTCGAGCCT 713 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 |||||||||||| |||||| | || || || || || || ||| || | | |||||| Sbjct 712 TTCACCTCCAACATGTACACTCGCCGAGTTCTGGCTGGAGAGTTCACCATTGTAAACAAG 653 Query 95224 CACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTG 95283 || | || | || ||||| | |||| | ||| | |||| |||||| | Sbjct 652 TACTTGCTCCATGATCTGACTGCCATGGGGCTCTGGACTCCGGAGGTGCGGAACCAGATT 593 Query 95284 CTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTC 95343 | || | || ||| ||||||| | | || || |||| | |||| |||| Sbjct 592 ATTGCCGACCGAGGTTCCATCCAGAATGTGAAGGTCATTCCTCAGGAGCTGAAGGAGCTC 533 Query 95344 TACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGG 95403 || |||||||||||||||||| ||| || ||||||| || || | ||| || Sbjct 532 TATAAGACCGTGTGGGAGATCAAGCAAAAGGTTGTACTCGATATGGCAGCTGACCGAGGC 473 Query 95404 CCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAGTCGCGGAAAA 95463 | ||||| || || || ||||||||||| | | || || Sbjct 472 GCTTTCATTTGTCAAAGCCAGAGCCTTAATATTCACATGGCCGAGCCTAATGTAGGCAAG 413 Query 95464 ATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGTATTATTTG 95523 | || |||||| ||||| | ||||| ||||| || ||||| || ||||| || | Sbjct 412 CTCACTTCCATGCACTTCTATGCGTGGAAGAAGGGACTGAAGACTGGCATGTACTACCTT 353 Query 95524 CGAACCAGGCCAAAGGCGGACTCCATACAGTTC 95556 || | |||| ||||| || |||| |||||| Sbjct 352 CGCTCGCGGCCGAAGGCTGATGCCATCCAGTTC 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492793884648680