Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq19842 100 3e-16 >seq19842 Length=884 Score = 100 bits (110), Expect = 3e-16 Identities = 162/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 || || || || |||||||| ||||| | | || || |||| || ||||| | ||| Sbjct 280 GACGCCGTCGCCATCGAAAAAGAGTTCGTCAAGGATGCTTTGCCTGTTGAGCTCATTGGC 339 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTT-GGTGCA 52732 |||||| | | |||||| ||||||| ||||| || || || | ||| | ||||| Sbjct 340 ATGAACTCTGACCTGATGTGCCAGTACATTGAGTTCGTCGCTGACAGGCTGCTCGGTGCT 399 Query 52733 GCTCGGGCAGCC--AAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790 || |||| ||| ||| | || | | || |||| || || || | ||| ||| ||| Sbjct 400 -CT-GGGCTGCCCTAAACT-CTACCAGGCAAGCAACCCTTTCGACTGGATGGACATGATT 456 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || ||| | |||||||||||||| || |||||| |||| || ||||| Sbjct 457 TCTCTTCAAGGCAAGACCAACTTCTTTGAGAAGAGAGTAGGGGAGTA 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494327082095760