Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq27863 87.8 2e-12 seq205478 86.0 6e-12 >seq27863 Length=140 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 126950 GTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATG 127009 ||||| ||| || ||||| || |||||| |||||| |||||||| || ||||| || Sbjct 19 GTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGGATA 78 Query 127010 CCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCG 127069 |||||||||||| ||| |||||||| | | || | |||||||| | ||| || ||| Sbjct 79 CCCTCCTTGTCCTGGATCTTCTGCTTTACATTCTCAATGGTGTCCGAAGGCTCAACATCG 138 Query 127070 A 127070 | Sbjct 139 A 139 >seq205478 Length=785 Score = 86.0 bits (94), Expect = 6e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || || || ||| | ||||| ||| || ||||| || |||||| | Sbjct 352 CTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAA 411 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||| | |||||||| || ||||| ||||||||||||||| || || ||||| | | Sbjct 412 GATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTTTGCTTCACATT 471 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCC 127086 |||| |||||||| | ||| || |||| || | || ||||| Sbjct 472 CTCGATGGTGTCCGAAGGCTCCACATCGAGAGTGATGGTCTTGCC 516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473646447923920