Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq66070 129 9e-25 >seq66070 Length=901 Score = 129 bits (142), Expect = 9e-25 Identities = 325/486 (67%), Gaps = 6/486 (1%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 || |||||| |||||||| ||||| | | |||| | || ||||||||||| Sbjct 308 CTGGTCCACAGTGAACTGGATGGCATCAGCCTTCGGCCGCGAGCGAAGGTAGTACATGCC 367 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 ||||| || ||||||| |||| | || | ||||||||||| || |||| || || || Sbjct 368 AGTCTTCAGTCCCTTCTTCCACGCATAGAAGTGCATGGAAGTGAGCTTGCCTACATTAGG 427 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017 |||||||||||||| || || ||||||||| |||||| ||||| || || || | Sbjct 428 CTCGGCCATGTGAATATTAAGGCTCTGGCTTTGACAAATGAAA-GCGCCTCGGTCAGCTG 486 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077 |||||| || | ||| ||| ||||||||||| ||||| | | || | | Sbjct 487 CCATATCGAGTACAACCTTTTGCTTGATCTCCCACACGGTCTTATAGAGCTCCTTCAGCT 546 Query 204078 GTTGAGGCA-CATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCT-CATCCT 204135 ||||| | | |||| || || ||| || || |||||| || | ||| ||| Sbjct 547 CCTGAGGAATGACCTTCACA-TTCTGGATGGAACCTCGGTCGGCAAT-AATCTGGTTCCG 604 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | |||| ||| | |||| |||| || | | || || ||| | || Sbjct 605 CACCTCCGGAGTCCAGAGCCCCATGGCAGTCAGATCATGGAGCAAGTACTTGTTTACAAT 664 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 || ||||| | ||| || | || ||| ||| |||| |||||| || |||| | Sbjct 665 GGTGAACTCTCCAGCCAGAACTCGGCGAGTGTACATGTTGGAGGTGAAAGGCTCGACGGA 724 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 ||| ||||| || | ||||| ||||| ||||| ||||| || || ||||| || || Sbjct 725 CTCATTGTTACCAATGATCTGGGCGGTTGAAGCCGTCGGCATAGGTGCAAGGAGAAGAGA 784 Query 204316 GTTGCG 204321 |||||| Sbjct 785 GTTGCG 790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 792054263690480