Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq205478 109 6e-19 seq14360 86.0 7e-12 seq27863 84.2 2e-11 >seq205478 Length=785 Score = 109 bits (120), Expect = 6e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| || |||||||| |||||||| | || || ||||||||||| Sbjct 347 GTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTGCCA 406 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| || | ||||||||||| | || | || |||||||||| ||||| | ||| Sbjct 407 GCGAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTTTGCTTC 466 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCC 46566 | || | | ||||| | |||||||| | |||||||| ||||| Sbjct 467 ACATTCTCGATGGTGTCCGAAGGCTCCACATCGAGAGTGATGGTCTTGCC 516 >seq14360 Length=163 Score = 86.0 bits (94), Expect = 7e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| || || || ||||| || |||||||| | || || ||||||||||| Sbjct 57 GTGCTCTCCTTCTGAATGTTATAGTCAGAGAGAGTGCGGCCATCCTCCAGCTGCTTGCCA 116 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 46501 ||||| || | ||||||||||| | || | || |||||||||| Sbjct 117 GCGAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 161 >seq27863 Length=140 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 46412 ATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGC 46471 || |||||||| || || ||||| | || || ||||||||||| ||||| |||| ||| Sbjct 1 ATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGC 60 Query 46472 TGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTT 46515 |||||||| | || | | |||||||||| |||||||| ||| Sbjct 61 TGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCTGCTT 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563034090353160