Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6469 98.7 4e-15 seq205478 84.2 9e-11 >seq6469 Length=903 Score = 98.7 bits (108), Expect = 4e-15 Identities = 191/282 (68%), Gaps = 9/282 (3%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || ||||| || ||||||||||| | || || ||||| || || |||||| Sbjct 581 GCCGTCATCACCGTTCCTGCCTATTTCAATGACTCTCAGCGTCAAGCTACCAAGGATGCA 640 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 |||| ||||| || | | ||||| |||| || || || || || || |||||||| Sbjct 641 GGACGCATTGCCGGCCTGGACGTTCTAAGAATCATCAACGAGCCCACCGCTGCTGCTCTC 700 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 || |||||||| ||| | || | || | || ||| ||| || ||||| Sbjct 701 GCCTATGGACT-GGACA--------AAGCCGATGGCAAGCTCATTGCAGTCTTCGATTTG 751 Query 451502 GGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAG 451561 || ||||| || |||| ||| | || ||| | || || ||||| || ||| Sbjct 752 GGAGGAGGCACGTTCGATATCTCTATTCTGGAGATTTCTGGCGGCGTCTTTGAGGTCAAG 811 Query 451562 GCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || ||||| || || ||| || ||||| |||||| | ||| Sbjct 812 GCCACCAACGGAGACACTATGCTTGGAGGCGAAGATTTCGAT 853 >seq205478 Length=785 Score = 84.2 bits (92), Expect = 9e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 391077 GGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAA 391136 || || || || ||||| ||||| || | || || | ||| || | | || ||||| Sbjct 516 GGCAAGACCATCACTCTCGATGTGGAGCCTTCGGACACCATCGAGAATGTGAAGCAAAAG 457 Query 391137 ATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAA 391196 ||||| || ||||| || ||||||||||| || || ||| | || ||| | || || || Sbjct 456 ATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATCTTCGCTGGCAAGCAG 397 Query 391197 CTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGA 391240 ||||||||||| | ||| | | || ||||| || | ||||| Sbjct 396 CTTGAAGATGGCCGCACTCTCTCCGACTATAACATCCAGAAGGA 353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1967820896032164