Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq120225 122 1e-22 seq221348 89.7 7e-13 >seq120225 Length=1199 Score = 122 bits (134), Expect = 1e-22 Identities = 245/363 (67%), Gaps = 3/363 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||| | || ||||| || ||| | || ||||||| ||| Sbjct 759 TCGAAGTCCTCACCACCAAGATGGGTATCTCCGTTGGTAGAAAGCACCTCAAAGACACCC 818 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||| | | | | |||||||| || || || || |||||||||| || | | Sbjct 819 TGGTCAATGGTCAGGAGAGTGACATCAAATGTTCCTCCTCCAAGGTCAAAAACAAGAATG 878 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| |||| | | | |||||||| |||| || || || || || || Sbjct 879 TTCTTCTCGACGTCCAGGCGGT---CCAGACCGTAGGCGAATGCAGCAGCAGTAGGCTCG 935 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| | || ||||||||||| | ||||| || || || || || Sbjct 936 TTGATGATACGTTGGACCTTGAGGCCAGCAATGACACCAGCATCCTTGGTAGCCTGGCGC 995 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||| || ||||| || ||||| || || || || ||| |||| | ||| ||||| Sbjct 996 TGAGCATCATTGAAGTATGCAGGGACGGTGACCACAGCATCCTTGACGTCCTTGCCGAGG 1055 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || | || | ||||| ||| |||||||| | || ||||| |||| ||| Sbjct 1056 TAGGTCTCAGAAATCTGCTTCATCTTGCCCAGAACCATAGCAGAGATCTCCTCAGGGGCA 1115 Query 7817 AAC 7819 ||| Sbjct 1116 AAC 1118 >seq221348 Length=795 Score = 89.7 bits (98), Expect = 7e-13 Identities = 147/211 (70%), Gaps = 6/211 (3%) Strand=Plus/Minus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || ||||| ||||| | |||||||| ||||| | ||||| |||| | |||||||| Sbjct 724 CCAATAAGGCGCTTGACGTCAAAAACGGTGTTCTCAGGGTTGATGGTAGCCTGGTTCTTG 665 Query 7997 GCCGCGTCCCCGATAAGACGTT---CATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || || ||||||||||| | |||| || ||| | || || || || || || Sbjct 664 GCAGCATCACCGATAAGACGCTCGCCATTGTTGTCC---CAAGCCACATAGGAGGGAGTG 608 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 | || || || || |||||| ||| || || || | | || || ||| ||||||| Sbjct 607 ATACGGTTACCCTGATCGTTCAGAATGATGTCCACCTTGCCATTCTGGTAGATGCCGACG 548 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGA 8144 || || || || || | ||||||||||| Sbjct 547 CAGCTGTATGTGGTACCAAGATCAATACCGA 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632655917045720