Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11-
01] 311,983 sequences; 85,142,588 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq120225 122 1e-22
seq221348 89.7 7e-13
>seq120225
Length=1199
Score = 122 bits (134), Expect = 1e-22
Identities = 245/363 (67%), Gaps = 3/363 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||| | || ||||| || ||| | || ||||||| |||
Sbjct 759 TCGAAGTCCTCACCACCAAGATGGGTATCTCCGTTGGTAGAAAGCACCTCAAAGACACCC 818
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|||||| | | | | |||||||| || || || || |||||||||| || | |
Sbjct 819 TGGTCAATGGTCAGGAGAGTGACATCAAATGTTCCTCCTCCAAGGTCAAAAACAAGAATG 878
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
||| | ||| |||| | | | |||||||| |||| || || || || || ||
Sbjct 879 TTCTTCTCGACGTCCAGGCGGT---CCAGACCGTAGGCGAATGCAGCAGCAGTAGGCTCG 935
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| | || ||||||||||| | ||||| || || || || ||
Sbjct 936 TTGATGATACGTTGGACCTTGAGGCCAGCAATGACACCAGCATCCTTGGTAGCCTGGCGC 995
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||| || ||||| || ||||| || || || || ||| |||| | ||| |||||
Sbjct 996 TGAGCATCATTGAAGTATGCAGGGACGGTGACCACAGCATCCTTGACGTCCTTGCCGAGG 1055
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | || | || | ||||| ||| |||||||| | || ||||| |||| |||
Sbjct 1056 TAGGTCTCAGAAATCTGCTTCATCTTGCCCAGAACCATAGCAGAGATCTCCTCAGGGGCA 1115
Query 7817 AAC 7819
|||
Sbjct 1116 AAC 1118
>seq221348
Length=795
Score = 89.7 bits (98), Expect = 7e-13
Identities = 147/211 (70%), Gaps = 6/211 (3%)
Strand=Plus/Minus
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
|| ||||| ||||| | |||||||| ||||| | ||||| |||| | ||||||||
Sbjct 724 CCAATAAGGCGCTTGACGTCAAAAACGGTGTTCTCAGGGTTGATGGTAGCCTGGTTCTTG 665
Query 7997 GCCGCGTCCCCGATAAGACGTT---CATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || || ||||||||||| | |||| || ||| | || || || || || ||
Sbjct 664 GCAGCATCACCGATAAGACGCTCGCCATTGTTGTCC---CAAGCCACATAGGAGGGAGTG 608
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113
| || || || || |||||| ||| || || || | | || || ||| |||||||
Sbjct 607 ATACGGTTACCCTGATCGTTCAGAATGATGTCCACCTTGCCATTCTGGTAGATGCCGACG 548
Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGA 8144
|| || || || || | |||||||||||
Sbjct 547 CAGCTGTATGTGGTACCAAGATCAATACCGA 517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632655917045720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |