Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq73356 91.5 2e-13 seq19842 87.8 2e-12 >seq73356 Length=1326 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 110853 GGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAAT 110912 ||| || |||| || |||| ||||| | || || ||||| || ||||| ||| Sbjct 1308 GGAGTTCGTGGCTCGGATGTTATGGATGCTGACGCCTATGCCACCAGCATACTTAGAAAT 1249 Query 110913 TTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAAT 110972 ||||||| |||| || ||||||| || ||||| || || ||| ||| || Sbjct 1248 GCACGCACACTGCTTGAGAGTGTCATAAATGCCCTCAATGGAGTCATTCTTCATGGTAAG 1189 Query 110973 TAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGC 111032 || ||||| || |||| ||| || || || || || ||||||||||| || || ||||| Sbjct 1188 CAGGAAGCAGGAGGACAGCTGCGGTCGCGGAGTACCGGCATTGAAGAGAGTGGGAGTCGC 1129 Query 111033 ATGAATGAACAGACCTT--GGGACATCTTGTTGTATGT 111068 |||| ||| ||| ||| | |||||| || ||| || Sbjct 1128 ATGAGTGA--AGAACTTGCGCGACATCAAGTCGTACGT 1093 >seq19842 Length=884 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||| || |||||||| ||| ||||| || ||||| ||||| |||||||| || Sbjct 203 TGAAGGCCCTCATCCCGGCTGATAAGCTCGTTGGAAAAGCAGAGTCCTGGCATGAGACCA 144 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCAC 119623 | ||||| ||||| ||||||| ||||| |||||| || ||||||||||| || Sbjct 143 CGCTTCTTGAGCCAGAAGATGGAGCAAAAGGATCCAGAGAAAAAGATGCCCTCAAC 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586679118757400