Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq12515 104 2e-17 >seq12515 Length=817 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29803 AGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCC 29862 || ||||| | ||| |||| |||||||| || || || | ||| ||||| || || Sbjct 260 AGTGGTTCTATGTGGTCCATATAGACGTGCGCATCACCAATAACGTGAACAAAGTCGCCA 201 Query 29863 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29922 |||| | | ||| || || | || | || | |||||||| || ||||| Sbjct 200 GGTTTCAAGTCACAGACTTGCGCTACCAGCCTCACAAGCAACGAGTAGCTAGCAATGTTG 141 Query 29923 AAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCG 29982 ||||| || ||||| ||||| ||| | || ||||| || | ||| || |||||||||||| Sbjct 140 AAGGGCACACCGAGGCCCATATCCGCTGATCTCTGATACATCTGGCAGGAGAGCTCTCCG 81 Query 29983 TCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCAT 30029 || ||| || |||||||| | | |||||||| || || ||||| Sbjct 80 TCTGCCACATAGAACTGACAGAACATATGGCACGGTGGGAGTGCCAT 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407063916236459