Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq8846 118 5e-22 >seq8846 Length=717 Score = 118 bits (130), Expect = 5e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25943 TCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTC 26002 |||||||||||||| || || ||||||||||| || | ||| || || |||||| Sbjct 481 TCTGGAATCCACATAGCGTAGAATAAATCTCTGGCGCGATGAAGTTCATTGCCATGATTC 540 Query 26003 TTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA 26062 ||||| | || || || || || || || | ||||| || || | || |||||||| Sbjct 541 TTTTTCAAGTCCAAAAACTCGAATATGTCGGCATGCCAAGGCTCAAGGTACATAGCAAAT 600 Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 || || | || |||||||| |||||||||||||| ||||| || ||||| || || Sbjct 601 GAGCCCTTGCGCTTGCCTCCACCCTGATCTACGTATCTAGCAGTATCGTTGAAGACCCTC 660 Query 26123 AACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 | ||| || || | ||| | || |||||| |||| | | || | ||| Sbjct 661 AGCATAGGGACAATGCCATTAGAGGTTCCGTTGGTGCCACGGATGTAGGA 710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252077867826725