Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq246504 116 1e-21 >seq246504 Length=158 Score = 116 bits (128), Expect = 1e-21 Identities = 120/155 (77%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 40430 GATCTGCGCGACCTTGTCG--GCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGCCA 40487 || ||| ||||||||||| ||||| || |||| |||| ||| || |||||| Sbjct 6 GACCTGGGCGACCTTGTCCTTGCCCCAGCGCTC--GGTGGCGTAGCGGACCATCTCGCCG 63 Query 40488 CGACGCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGG 40547 || || || || |||||||||||||||| |||||||| |||||||| |||||||| ||| Sbjct 64 CGCCGGCGATCGTCGAAGTCGATGTCGATGTCGGGCATCGACACGCGTTCGGGGTTGAGG 123 Query 40548 AACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTC 40582 || |||||||| | ||||||||| | |||||| Sbjct 124 AATCGCTCGAACAGCAGTCCGTGCGGGATCGGGTC 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163277639900244