Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq119433 114 4e-20 seq8846 87.8 5e-12 >seq119433 Length=891 Score = 114 bits (126), Expect = 4e-20 Identities = 202/293 (69%), Gaps = 6/293 (2%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||| | ||| ||||||||||| ||||| | || |||||||| ||| Sbjct 519 TCCATAGCTTTGACCAGACGGCGCTGAATATACCCAGTCTCTGCAGTCTTTACAGCGGTA 460 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 || || | || | ||||| ||||| ||||| ||||| | ||||| || ||||| Sbjct 459 TCGATCAAGCCCTCGCGACCGCCCATCGCATGAAAGAAGAACTCTTGTGGAGTAAGCCCT 400 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGA---ATCGTCGAACTTGGTA 302751 || |||| |||| || ||||| || || ||| ||| || ||| | Sbjct 399 TTAAGGTAGGAATTCTCGACAAAACCGCGACTTTCTGGCCCTAGATCATC---CTTCGCG 343 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| || || || | || | ||||||| |||||||||||||| || |||||||| Sbjct 342 AAGTGAGGAAGAGTACGGTAGCGAAAGCCGTACGGGATACGCTTTCCCTCTACGTTCTGT 283 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 ||||||| || | || ||||| |||||||| | || | ||||| || || Sbjct 282 TGTCCCACACAAGCGATAATCTGTGAAATATTGATGACAGTACCCTTAGACCC 230 >seq8846 Length=717 Score = 87.8 bits (96), Expect = 5e-12 Identities = 317/490 (65%), Gaps = 7/490 (1%) Strand=Plus/Plus Query 155664 TTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATG 155723 |||||||| || | ||||| || |||||||| | ||| || |||||||| || ||| Sbjct 217 TTGATGGTCCCCAGATTCTGTTGATTAGATTTCCGGTTGCAGTGGTCCTTGTACAGCATG 276 Query 155724 TATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTA 155783 || ||||| || ||||| ||||| | || || ||| | |||||| | | || || Sbjct 277 TAAGGGGTGCCAGTCTCAATCTGGGAATCTAGGATCGCAAACCAGAGCTGCTGAGCCTTC 336 Query 155784 ATTTGC-TTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGTTCGGTAATCCTC 155842 | | || ||| | | ||||| |||||| ||| ||| || | | || || Sbjct 337 ACCACCCTTCTTGCCTTT-CCTTCTCTCTCATACTTCTCATAAAGAGCCTCAAACTCGTC 395 Query 155843 ACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATT 155902 || | ||| | || |||||| | ||||| ||||| ||||| || Sbjct 396 TCCCCACACGTCAGGTAACCCTCGGCACTCGTTAGGGCAGAACAGAGACCACTCGCCGTT 455 Query 155903 ACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC 155962 | ||| || | ||| || | || ||| ||||| ||||| | || || || Sbjct 456 CGCTTGTACGCGTTTCATGAAGAGGTCTGGAATCCACATAGCGTAGAATAAATCTCTGGC 515 Query 155963 -CTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGAT 156021 | ||| |||| ||| |||||||| | || || || || || || | || Sbjct 516 GCGATGAAGT-TCATTGCCATGATTCTTTTTCAAGTCCAAAAACTCGAATATGTCGGCAT 574 Query 156022 GGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTGCC---ACCCTGATCTACAT 156078 | ||||| || ||||||||||| || || | |||||| |||||||||||| | Sbjct 575 GCCAAGGCTCAAGGTACATAGCAAATGAGCCCTTGCGCTTGCCTCCACCCTGATCTACGT 634 Query 156079 ACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGG 156138 | | |||||| | |||||||| | |||||||| | ||| ||||| || || || |||| Sbjct 635 ATCTAGCAGTATCGTTGAAGACCCTCAGCATAGGGACAATGCCATTAGAGGTTCCGTTGG 694 Query 156139 TTCCGCGAAT 156148 | || || || Sbjct 695 TGCCACGGAT 704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1465934329724271