Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq246504 107 6e-19 >seq246504 Length=158 Score = 107 bits (118), Expect = 6e-19 Identities = 118/155 (76%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 40178 GATCTGCGCGACCTTGTCG--GCCCCGTACTTCCGGGTGACGTACTGGATGACCTCGCCA 40235 || ||| ||||||||||| ||||| || |||| |||| ||| | |||||| Sbjct 6 GACCTGGGCGACCTTGTCCTTGCCCCAGCGCTC--GGTGGCGTAGCGGACCATCTCGCCG 63 Query 40236 CGACGCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGG 40295 || || || || |||||||||||||||| |||||||| |||||||| |||||||| ||| Sbjct 64 CGCCGGCGATCGTCGAAGTCGATGTCGATGTCGGGCATCGACACGCGTTCGGGGTTGAGG 123 Query 40296 AAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTC 40330 || |||||||| | || |||||| | |||||| Sbjct 124 AATCGCTCGAACAGCAGTCCGTGCGGGATCGGGTC 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162719714587194