Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq14360 122 6e-23 seq205478 104 2e-17 seq10776 91.5 1e-13 >seq14360 Length=163 Score = 122 bits (134), Expect = 6e-23 Identities = 99/120 (83%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||||| ||||||||||||||||||||||||||| || || |||| |||| Sbjct 41 CAGGACAAGGTGAAGGGTGCTCTCCTTCTGAATGTTATAGTCAGAGAGAGTGCGGCCATC 100 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || |||||||| || || |||||||| | || | ||||||||||| Sbjct 101 CTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTC 160 >seq205478 Length=785 Score = 104 bits (114), Expect = 2e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||||||||||||| ||||||||||| || || |||| |||| Sbjct 332 AGAACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCT 391 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || |||||||| | || | ||||||||||| Sbjct 392 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 451 Query 34886 TTTATTTTTTGTTTGAC 34902 | || ||||| || || Sbjct 452 TGAATCTTTTGCTTCAC 468 >seq10776 Length=1512 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||||||||||||||| ||||||||||| || |||| |||| Sbjct 481 AGGACAAGGTGAAGGGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGTGCGGCCATCC 422 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || |||||||| || |||||||| || ||||| || Sbjct 421 TCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATC 384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324454420607477