Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_023744.1 Length=60588 Score E Sequences producing significant alignments: (Bits) Value seq243652 98.7 4e-16 >seq243652 Length=196 Score = 98.7 bits (108), Expect = 4e-16 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 49816 GTGTGGCTGTTCCTGCACTCCGGGTCGCGTGGCGTCGGCAACAAGATCGCCCAAAAGCAC 49875 || ||||||||||| |||||||| || || || || ||||||||||| || |||||| Sbjct 5 GTCTGGCTGTTCCTCCACTCCGGCAGCCGCGGTGTGGGAAACAAGATCGCGCAGAAGCAC 64 Query 49876 ATCAAGGTCGCGCAGAAACTCATGGACCGCTGGTGGATTCAGCTCCCAAGC----CCCGA 49931 ||| | |||||||||| | || |||| ||||| || | ||| || ||||| Sbjct 65 ATCCGGATCGCGCAGAAGC---TGTGCCGCCGGTGG-CACATCCCCCTGGCTCATCCCGA 120 Query 49932 CCTGGCGTACTTGCCGCAAGGCACACCGGAGTTCGCCGACTATCTGCGGGAGCTGCACTG 49991 || |||||| || | ||||| ||||||| || |||| | || ||| ||| ||| Sbjct 121 TCTCGCGTACCTGGCCTCGGGCACGGACGAGTTCGGCGCCTATATCCGCGAGTTGCGCTG 180 Query 49992 GGCGCAGCGGTTCGC 50006 ||||||| ||||| Sbjct 181 GGCGCAGGCCTTCGC 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193042158315300