Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq12515 140 4e-28 >seq12515 Length=817 Score = 140 bits (154), Expect = 4e-28 Identities = 189/261 (72%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 || || || | ||||| | ||||||||||| || || | ||| |||||||| || Sbjct 260 AGTGGTTCTATGTGGTCCATATAGACGTGCGCATCACCAATAACGTGAACAAAGTCGCCA 201 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTG 147039 || || | | | || || || |||| |||| ||||||||| || |||||| Sbjct 200 GGTTTCAAGTCACAGACTTGCGCTACCAGCCTCACAAGCAACGAGTAGCTAGCAATGTTG 141 Query 147040 AAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCG 147099 ||||| || || |||||||| ||| | || ||||| |||| |||||| |||||||| ||| Sbjct 140 AAGGGCACACCGAGGCCCATATCCGCTGATCTCTGATACATCTGGCAGGAGAGCTCTCCG 81 Query 147100 TCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT-GGCGGGCAGGTC 147158 || ||||| || ||||| || | || |||||||| || || ||||| ||| | || || Sbjct 80 TCTGCCACATAGAACTGACAGAACATATGGCACGGTGGGAGTGCCATCTGCGAG-AGATC 22 Query 147159 CGCGGGGTTCCAGGCCGAGAC 147179 || |||||||| || || || Sbjct 21 TGCTGGGTTCCAAGCAGAAAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581212520791200