Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq246504 123 8e-24 >seq246504 Length=158 Score = 123 bits (136), Expect = 8e-24 Identities = 115/144 (80%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 40102 GATCTGTGCGACCTTGTC--GGCCCCGTACTTCTCGGTGACGTACCGGATGACCTCGCCG 40159 || ||| ||||||||||| ||||| | ||||||| |||| |||| | ||||||| Sbjct 6 GACCTGGGCGACCTTGTCCTTGCCCC--AGCGCTCGGTGGCGTAGCGGACCATCTCGCCG 63 Query 40160 CGACGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGG 40219 || || || || |||||||||||||| | ||||||||| |||||||| |||||||| ||| Sbjct 64 CGCCGGCGATCGTCGAAGTCGATGTCGATGTCGGGCATCGACACGCGTTCGGGGTTGAGG 123 Query 40220 AACCGCTCGAAGATGAGCCCGTGC 40243 || |||||||| | || |||||| Sbjct 124 AATCGCTCGAACAGCAGTCCGTGC 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159812126670042