Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq12515 105 6e-18 >seq12515 Length=817 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 34550 GCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAA 34609 || |||||||| |||||| | | |||||| ||||| |||||||| | |||| || Sbjct 7 GCTTGGAACCCAGCAGATCTCTCGCAGATGGCACTCCCACCGTGCCATATGTTCTGTCAG 66 Query 34610 TTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGG 34669 ||||| || || | || ||||| ||||||||| | ||||| |||| | || ||||| Sbjct 67 TTCTATGTGGCAGACGGAGAGCTCTCCTGCCAGATGTATCAGAGATCAGCGGATATGGGC 126 Query 34670 TTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCT 34707 | || ||||| |||||||||||||| ||| | |||| Sbjct 127 CTCGGTGTGCCCTTCAACATTGCTAGCTACTCGTTGCT 164 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 6638 AGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGA 6697 |||| | ||| |||||||||||||| ||||| || | ||||| || | |||| ||| Sbjct 164 AGCAACGAGTAGCTAGCAATGTTGAAGGGCACACCGAGGCCCATATCCGCTGATCTCTGA 105 Query 6698 TAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGG 6757 || | ||||||||| ||||| || | || || ||||| || |||| | |||||||| Sbjct 104 TACATCTGGCAGGAGAGCTCTCCGTCTGCCACATAGAACTGACAGAACATATGGCACGGT 45 Query 6758 GGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 ||||| |||||| | | |||||| |||||||| || Sbjct 44 GGGAGTGCCATCTGCGAGAGATCTGCTGGGTTCCAAGC 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446514271895760