Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq12515 96.9 3e-15 >seq12515 Length=817 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 118468 AGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCA 118527 ||||| || ||||| | ||||||||| || ||||| ||||| || | || || ||| Sbjct 260 AGTGGTTCTATGTGGTCCATATAGACGTGCGCATCACCAATAACGTGAACAAAGTCGCCA 201 Query 118528 GGTGT-AAGCC-CTGTCAGGTGAGCAATCATGTATGTCAACAAACT-GTAGCTGGCTACA 118584 ||| | ||| | | | | || || | || | | ||| ||| |||||| || | Sbjct 200 GGTTTCAAGTCACAGACT--TGCGCTACCA-GCCTCACAAGCAACGAGTAGCTAGCAATG 144 Query 118585 TTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCC 118644 || || || ||||| || ||||| || ||||||||||| |||| ||||| |||||||| Sbjct 143 TTGAAGGGCACACCGAGGCCCATATCCGCTGATCTCTGATACATCTGGCAGGAGAGCTCT 84 Query 118645 CCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 |||| ||| ||||| ||||||| | || || || || || || |||| Sbjct 83 CCGTCTGCCACATAGAACTGACAGAACATATGGCACGGTGGGAGTGCCAT 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412900837842412