Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq12515 123 2e-23 >seq12515 Length=817 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 29644 CCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTC 29703 ||| || ||||| | |||||| | |||||||| ||||| || | ||| ||||| || Sbjct 264 CCTGAGTGGTTCTATGTGGTCCATATAGACGTGCGCATCACCAATAACGTGAACAAAGTC 205 Query 29704 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29763 || |||| | | ||| || || | || | || | |||||||| || || Sbjct 204 GCCAGGTTTCAAGTCACAGACTTGCGCTACCAGCCTCACAAGCAACGAGTAGCTAGCAAT 145 Query 29764 GTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTC 29823 ||| |||||||| ||||| ||||| ||| |||| ||||| || | |||||| |||||||| Sbjct 144 GTTGAAGGGCACACCGAGGCCCATATCCGCTGATCTCTGATACATCTGGCAGGAGAGCTC 85 Query 29824 TCCGTCGCTCACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 |||||| ||| || |||||||| | ||||||||| || || ||||| Sbjct 84 TCCGTCTGCCACATAGAACTGACAGAACATATGGCACGGTGGGAGTGCCAT 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404618848583938