Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_030901.1 Length=92618 Score E Sequences producing significant alignments: (Bits) Value seq243652 132 3e-26 >seq243652 Length=196 Score = 132 bits (146), Expect = 3e-26 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 47229 TCTGGCTCTTCCTGCATTCCGGCAGCCGCGGTGTGGGAAACAAGATCGCGCAGAAGCACA 47288 ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 6 TCTGGCTGTTCCTCCACTCCGGCAGCCGCGGTGTGGGAAACAAGATCGCGCAGAAGCACA 65 Query 47289 NNNNNNNNNNNNNNNNNNNNNNNNNNAAGTGGCACATCCAGCTCGCCAACCCCGACCTGG 47348 ||||||||||| || || | ||||| || | Sbjct 66 TCCGGATCGCGCAGAAGCTGTGCCGCCGGTGGCACATCCCCCTGGCTCATCCCGATCTCG 125 Query 47349 CCTACCTGCCGTCCGGGACTGACGAGTTCGGCGACTACATCCGCGAGCTCCGGTGGGCAC 47408 | |||||| | || || || ||||||||||||| ||| ||||||||| | || ||||| | Sbjct 126 CGTACCTGGCCTCGGGCACGGACGAGTTCGGCGCCTATATCCGCGAGTTGCGCTGGGCGC 185 Query 47409 AGGCTTTCGC 47418 |||| ||||| Sbjct 186 AGGCCTTCGC 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295126360107877