Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq243652 132 3e-26 >seq243652 Length=196 Score = 132 bits (146), Expect = 3e-26 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 45720 TGGCTGTTCCTGCACTCCGGTAGCCGCGGTGTCGGCAACAAGATCGCGCAGAAGCANNNN 45779 ||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| Sbjct 8 TGGCTGTTCCTCCACTCCGGCAGCCGCGGTGTGGGAAACAAGATCGCGCAGAAGCACATC 67 Query 45780 NNNNNNNNNNNNNNNNNGTGCAAGCGCTGGCACATCGAGCTCGCCAACCCCGACCTGGCC 45839 |||| || ||||||||| || || | ||||| || || Sbjct 68 CGGATCGCGCAGAAGCTGTGCCGCCGGTGGCACATCCCCCTGGCTCATCCCGATCTCGCG 127 Query 45840 TACCTGGCGTCCGGGACCGACGAGTTCGGTGCCTACATCCGCGAGCTCCGGTGGGCCCAG 45899 |||||||| || || || ||||||||||| ||||| ||||||||| | || ||||| ||| Sbjct 128 TACCTGGCCTCGGGCACGGACGAGTTCGGCGCCTATATCCGCGAGTTGCGCTGGGCGCAG 187 Query 45900 GCGTTCGC 45907 || ||||| Sbjct 188 GCCTTCGC 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 298183491631694