Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_031029.1 Length=93686 Score E Sequences producing significant alignments: (Bits) Value seq243652 107 1e-18 >seq243652 Length=196 Score = 107 bits (118), Expect = 1e-18 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 48594 TCTGGCTCTTCCTGCATTCCGGCAGCCGCGGTGTCGGCAACAAGATCGCGCAGAAGCANN 48653 ||||||| ||||| || ||||||||||||||||| || |||||||||||||||||||| Sbjct 6 TCTGGCTGTTCCTCCACTCCGGCAGCCGCGGTGTGGGAAACAAGATCGCGCAGAAGCACA 65 Query 48654 NNNNNNNNNNNNNNNNNNNNNNNNNNAAGTGGCACATTCAACTCGCCAACCCCGACCTCG 48713 ||||||||| | || || | ||||| |||| Sbjct 66 TCCGGATCGCGCAGAAGCTGTGCCGCCGGTGGCACATCCCCCTGGCTCATCCCGATCTCG 125 Query 48714 CCTACCTGCCTTCCGGGACCGACGAATTCGGCGACTACATTCGCGAGCTCCGGTGGGCAC 48773 | |||||| | || || || ||||| ||||||| ||| || |||||| | || ||||| | Sbjct 126 CGTACCTGGCCTCGGGCACGGACGAGTTCGGCGCCTATATCCGCGAGTTGCGCTGGGCGC 185 Query 48774 AGGCTTTCGC 48783 |||| ||||| Sbjct 186 AGGCCTTCGC 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 298530965391961