Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq18 89.7 8e-13 >seq18 Length=517648 Score = 89.7 bits (98), Expect = 8e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 77362 AGCAGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAGAGGCTGGCGAAG 77421 || |||||||||||||| ||||| |||| |||||||||||||| || ||||||| Sbjct 253897 AGGAGGGTGGAGTAGCAGAGGTTAAAGGCCTGCATGATGGAGGGGTACAGAGAGGCGAAG 253838 Query 77422 TCGAAGACCGCCACGGGGTCGTTGTAGTAGCCCACCACGGGCTCGAAGACGGTGGCACCC 77481 || | | || | |||||| | |||| || | | |||||||| ||||||||| ||| Sbjct 253837 TCCAGGGTGGCAATGGGGTCCTGGTAGAAGGCTTTCTTGGGCTCGATGACGGTGGCGCCC 253778 Query 77482 TGGTAGG 77488 | ||||| Sbjct 253777 TCGTAGG 253771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771343804954080