Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02-
18] 684 sequences; 27,589,342 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq25 147 1e-30
>seq25
Length=633890
Score = 147 bits (162), Expect = 1e-30
Identities = 326/485 (67%), Gaps = 17/485 (4%)
Strand=Plus/Minus
Query 25422 TTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCT 25481
||||||| ||||| |||| |||||| || || || || || | ||||| | ||||||
Sbjct 456324 TTCAGCGCGTCTACATGATTCAGGTACACATGTGCATCCCCAATCGTGTGAATGAACTCT 456265
Query 25482 CCCGGTT-CTAGCC-CGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGA 25539
|| | || | |||| | | || | ||| | || | || | ||| ||| ||| |
Sbjct 456264 CCGGCTTTCAAGCCACAG--ACTTGAGCTACCAAGCGTGTCAAGAGTGCGTAAGAGGCAA 456207
Query 25540 TGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGC 25599
| || || || || || ||||||||||| | || | ||| || | |||||| ||||||
Sbjct 456206 TATTGAACGGCACACCCAACCCCATGTCTGCG-GAACGCTGATACATCTGACAAGAGAGC 456148
Query 25600 TCTTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCC 25659
||| |||| |||||| || || || | ||| ||||| || || || || |||
Sbjct 456147 TCTCCGTCTGCCACGTAGAATTGGCAAAACATGTGACACGGCGGCAGGGCCATCTTTCCC 456088
Query 25660 AAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATA 25719
|| || ||||||||||| | || ||||||| | || |||||||||||| ||||
Sbjct 456087 AAATCCGCGGGGTTCCAGGCCGATACAATGATGCGGCGATCCTCTGGGTTGTCCTTGAT- 456029
Query 25720 AGATCCGCGGTGTTT------TGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTC 25773
| |||| || || ||| || | || | || | ||||||||| |
Sbjct 456028 -----GGTGGTGATTGCCCGAGCCAACTGGTCGATGCCTTTGCCAGTGTAGTCTGCGTGC 455974
Query 25774 ATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCT 25833
||||||| ||||| || ||||||| || ||| ||||| ||||| || || || | ||
Sbjct 455973 ATGTCCGAATACTCCGCCCCGAAATGCCGCCATTGGAAGCCGTAGACGGGGCCCAAATCC 455914
Query 25834 CCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCC 25893
|| ||||||| ||| || |||| || |||| | | || | || || |||||
Sbjct 455913 CCCTCTTCCCGGTGAGAAAGGCCCAATTTGTCCAGATATTCCCGAGAGGAGTTCCCGTCC 455854
Query 25894 CAGAT 25898
|||||
Sbjct 455853 CAGAT 455849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340134764527932
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |