Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq46 96.9 5e-16 >seq46 Length=35757 Score = 96.9 bits (106), Expect = 5e-16 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || |||||||||||||| ||||| || |||| ||||| || Sbjct 7364 CTCCGCGACAACATCCAGGGCATCACCAAGCCAGCCATCCGGCGCTTGGCCCGTCGGGGA 7305 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||||| |||| || ||| | || || |||| || | || | ||| ||||| Sbjct 7304 GGGGTCAAGCGCATCTCGGGTTTGATATACGAGGAGACACGGGGGGTACTCAAGGTCTTC 7245 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| |||| ||| | || || || || || || || || || || Sbjct 7244 TTGGAGAACGTGATCCGAGATTCGGTCACGTACACAGAACATGCCCGGCGCAAAACCGTG 7185 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || |||| |||| || || ||||| || || || Sbjct 7184 ACGGCCCTGGACGTCGTGTACGCCTTGAAGCGGCAGGG 7147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074574614012