Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_009237.1 Length=37446 Score E Sequences producing significant alignments: (Bits) Value seq469 111 4e-20 >seq469 Length=644 Score = 111 bits (122), Expect = 4e-20 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 876 GATCCGCTTCGCCTCGGGTTTCCGGGTGACTGCGCTGTCGTCGCGCCCGTCGAACCT-GC 934 |||||||||||| ||||||||||| | || ||||| | || |||| || | | || Sbjct 197 GATCCGCTTCGCGTCGGGTTTCCGCATTACCGCGCTTCCCTCCGTCCCG-CGCGCGTTGC 255 Query 935 GCGGCAAGCAAGGTCGCGTGATCATCGACGAAGCTGCGTTCCACGAGCAGCTCGGCGAGC 994 |||||||||| || ||| ||||||||||| || ||||||||| || | | | ||| Sbjct 256 GCGGCAAGCAGGGCATCGTCATCATCGACGAGGCGGCGTTCCACAAGAATGTTGCCGAAG 315 Query 995 TGCTGAAAGCTGCAATGGCCCTGCTGATGTGGGGCGGTCAGGTCCACATCATTTCGACGC 1054 | | || || || ||||| |||| || ||||| || |||||| | |||||||| | Sbjct 316 TAATCAAGGCGGCGATGGCGTTGCTAATCTGGGGTGGGCAGGTCGTTGTGATTTCGACCC 375 Query 1055 ACGACGGC 1062 |||||||| Sbjct 376 ACGACGGC 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119704627691264