Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq25 89.7 6e-13 >seq25 Length=633890 Score = 89.7 bits (98), Expect = 6e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 40035 AAAGAAAAACCAGACGATCGCGGGATCATCGTTTCCGCCTGGAACCCTGTTGATCTTGAT 40094 || || || ||||| |||||| | ||||| || || ||||||||||| | ||| | | Sbjct 456032 AAGGACAACCCAGAGGATCGCCGCATCATTGTATCGGCCTGGAACCCCGCGGATTTGGGA 456091 Query 40095 GATATGGCTTTGCGTCCGTGTCAC-TGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACT 40153 | ||||| ||| ||||||||| ||||| | ||| ||| ||| |||| | || Sbjct 456092 AAGATGGCCCTGCCGCCGTGTCACATGTTT-TGCCAATTCTACGTGGCAGACGGAGAGCT 456150 Query 40154 GTCTCTACAGTGGTATCAGCGTTCAGTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGC 40213 ||| ||| |||||||||||| | || | || || ||||||||||||| || Sbjct 456151 CTCTTGTCAGATGTATCAGCGTTCCGCAGACATGGGGTTGGGTGTGCCGTTCAATATTGC 456210 Query 40214 CTCCTACGCTCTCCTGAC 40231 ||| ||||| ||| |||| Sbjct 456211 CTCTTACGCACTCTTGAC 456228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565588764174720