Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02-
18] 684 sequences; 27,589,342 total letters
Query= NC_015287.1
Length=232878
Score E
Sequences producing significant alignments: (Bits) Value
seq684 619 2e-172
>seq684
Length=114989
Score = 619 bits (686), Expect = 2e-172
Identities = 717/965 (74%), Gaps = 6/965 (1%)
Strand=Plus/Plus
Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374
|| || || ||| | ||| | |||||||| ||||| | ||||| ||| | | ||
Sbjct 68484 ACAGAAAACCGTTTATACATCGGTTGGTTCGGTGTTTTAATGATCCCTACATTATTAACA 68543
Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434
||||| | || |||||| | || |||||||| |||||||| || |||||||| || |||
Sbjct 68544 GCTACAAGCTGCTTCATCATCGCTTTCATCGCAGCACCTCCAGTAGATATCGATGGTATC 68603
Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494
| || ||||| ||||| || | | || || |||||||| ||| | ||||| ||| |
Sbjct 68604 CGTGAACCAGTGGCTGGATCACTTTTATACGGAAACAACATTATCACAGGTGCGGTTATT 68663
Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554
|| ||||| ||||| || || | ||||||||||| | |||||||| || | || |||
Sbjct 68664 CCAAGTTCTAACGCTATTGGTATTCACTTCTACCCAGTTTGGGAAGCTGCGTCTGTAGAC 68723
Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614
|||||||| ||||| ||||| |||| |||||| || | || |||||| | | ||| |
Sbjct 68724 GAATGGCTTTACAACGGTGGTCCTTACCAACTTGTAGTATTACACTTCTTATTAGGTGTA 68783
Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674
|| ||| ||| | | ||||||||| ||| | ||||| ||| | ||||||||
Sbjct 68784 GCTTGCTACATGGGACGTGAATGGGAACTTAGCTACCGTTTAGGGATGCGTCCTTGGATT 68843
Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734
| || |||| ||| || || ||| |||| || |||||||||| | | || ||| ||
Sbjct 68844 TTCGTAGCTTTCTCAGCTCCAGTAGCTGCAGCAAGTGCAGTATTCTTAATTTACCCAATC 68903
Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794
|| || ||| |||||||||| |||||| | || |||||||| || ||||||| ||||
Sbjct 68904 GGACAAGGTAGCTTCTCTGATGGTATGCCTTTAGGTATCTCTGGTACTTTCAACTTCATG 68963
Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854
|| || ||||| || || ||||||||||| |||||||||||||| ||| ||||| |||
Sbjct 68964 TTAGTATTCCAAGCAGAACACAACATTCTTATGCACCCATTCCATATGGCTGGTGTTGCT 69023
Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914
||||| || ||||| || || ||| ||||||||||||||| ||||| |||||| | ||
Sbjct 69024 GGTGTGTTTGGTGGATCTTTATTCAGTGCAATGCACGGTTCTCTTGTAACATCTAGTTTA 69083
Query 215915 ATCAGAGAGACAACTGAGCA---AGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAG 215971
||| | || |||||| | | |||| |||||||||||||| || ||||||||
Sbjct 69084 ATCCGTGA---AACTGAAGACGGTGTATCTGCTAACTACGGTTACAAATTTGGACAAGAA 69140
Query 215972 GAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATAC 216031
|| ||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct 69141 GAAGAAACTTACAACATCGTAGCTGCACACGGTTACTTTGGACGTTTAATCTTCCAATAC 69200
Query 216032 GCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGT 216091
||| ||||||||||||| | | | ||||||||| | || || | || ||| | ||
Sbjct 69201 GCAAGTTTCAACAACTCACGTGCTTTACACTTCTTCTTAGCTGCTTGGCCAGTTGTAGGT 69260
Query 216092 ATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTC 216151
|||||| |||||| | || | || ||||| |||||| | ||||| |||||||||
Sbjct 69261 ATCTGGTTAACTGCTCTTGGAATTAGCACAATGGCATTCAACTTAAACGGATTCAACTTC 69320
Query 216152 AACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAAC 216211
||||| || || || || ||| || || |||||||| ||| || | |||
Sbjct 69321 AACCAATCAGTTGTTGATAGCCAAGGTCGTGTGATCAACACTTGGGCTGACATTATCAAC 69380
Query 216212 AGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGAC 216271
| || | | |||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct 69381 CGTGCTGATTTAGGTATGGAAGTAATGCACGAACGTAACGCGCACAACTTCCCTCTAGAT 69440
Query 216272 TTGGC 216276
|| ||
Sbjct 69441 TTAGC 69445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 745075229552320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |