Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq684 96.9 3e-14 >seq684 Length=114989 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || ||||| || ||||||||||||||||| ||| | ||||| || ||||| || Sbjct 35337 GCTGTTATTACTGTCCCTGCATATTTTAATGACTCTCAAAGACAAGCAACAAAAGACGCA 35396 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || ||||| ||| | | || || |||||||| |||||||| || || || || ||| Sbjct 35397 GGTAAAATTGCAGGATTAGAAGTACTACGTATTATAAATGAACCAACAGCCGCAGCTCTT 35456 Query 550520 GCATATGG 550527 || ||||| Sbjct 35457 GCTTATGG 35464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029259826995160