Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq684 663 0.0 >seq684 Length=114989 Score = 663 bits (734), Expect = 0.0 Identities = 721/954 (76%), Gaps = 2/954 (0%) Strand=Plus/Plus Query 154993 GACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCT 155052 || ||||| | || ||||||||||||||||| | ||||||||| | | | ||| Sbjct 68487 GAAAACCGTTTATACATCGGTTGGTTCGGTGTTTTAATGATCCCTACATTATTAACAGCT 68546 Query 155053 GCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGT 155112 | | |||||||| |||| ||||| || |||||||| ||||| || |||||||| ||| Sbjct 68547 ACAAGCTGCTTCATCATCGCTTTCATCGCAGCACCTCCAGTAGATATCGATGGTATCCGT 68606 Query 155113 GAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCT 155172 ||||| || ||||| || | | || || |||||||| ||| | ||||| ||| | || Sbjct 68607 GAACCAGTGGCTGGATCACTTTTATACGGAAACAACATTATCACAGGTGCGGTTATTCCA 68666 Query 155173 AGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAG 155232 ||||| ||||| |||||| | |||||||| || |||||||||| || || | || || Sbjct 68667 AGTTCTAACGCTATTGGTATTCACTTCTACCCAGTTTGGGAAGCTGCGTCTGTAGACGAA 68726 Query 155233 TGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACA 155292 ||| | ||||| |||||||||| |||||||||||| || |||||| | | || | | Sbjct 68727 TGGCTTTACAACGGTGGTCCTTACCAACTTGTAGTATTACACTTCTTATTAGGTGTAGCT 68786 Query 155293 GCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGT 155352 ||| || ||| | ||||||||| |||||| | || |||||||||||||| | Sbjct 68787 TGCTACATGGGACGTGAATGGGAACTTAGCTACCGTTTAGGGATGCGTCCTTGGATTTTC 68846 Query 155353 GTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGT 155412 || || | ||| || |||||| |||| || || |||||| | |||| || |||| Sbjct 68847 GTAGCTTTCTCAGCTCCAGTAGCTGCAGCAAGTGCAGTATTCTTAATTTACCCAATCGGA 68906 Query 155413 CAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTC 155472 |||||| |||||||||| |||||| | ||||||||||||||||| |||| ||||| Sbjct 68907 CAAGGTAGCTTCTCTGATGGTATGCCTTTAGGTATCTCTGGTACTTTCAACTTCATGTTA 68966 Query 155473 GTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGT 155532 || ||||||||||||||||| || ||||||||||| ||||| ||| ||| || || ||| Sbjct 68967 GTATTCCAAGCAGAACACAACATTCTTATGCACCCATTCCATATGGCTGGTGTTGCTGGT 69026 Query 155533 GTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATC 155592 ||||| ||||||||| | ||| ||| ||||||||||| | || |||||| ||||| Sbjct 69027 GTGTTTGGTGGATCTTTATTCAGTGCAATGCACGGTTCTCTTGTAACATCTAGTTTAATC 69086 Query 155593 CGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAA 155652 ||||||||| || | ||| ||||| |||||||| || ||||||||||||||| Sbjct 69087 CGTGAAACTGAAGACGGTGTATCTGCTAACTACGGTTACAAATTTGGACAAGAAGAAGAA 69146 Query 155653 ACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCC 155712 ||||| ||||| || ||||| || || ||||| || ||| | |||||||| || ||| Sbjct 69147 ACTTACAACATCGTAGCTGCACACGGTTACTTTGGACGTTTAATCTTCCAATACGCAAGT 69206 Query 155713 TTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGG 155772 |||||||||||| | | | ||||||||| | ||||| ||||| || || | |||||| Sbjct 69207 TTCAACAACTCACGTGCTTTACACTTCTTCTTAGCTGCTTGGCCAGTTGTAGGTATCTGG 69266 Query 155773 GCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAG 155832 ||||||| | || | || |||||||||||| | ||||| |||||||||||||| Sbjct 69267 TTAACTGCTCTTGGAATTAGCACAATGGCATTCAACTTAAACGGATTCAACTTCAACCAA 69326 Query 155833 TCTGTAGTAGA-CGCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGC 155891 || || || || || | ||| || ||| || ||||| |||||| | ||||| || Sbjct 69327 TCAGTTGTTGATAGCCA-AGGTCGTGTGATCAACACTTGGGCTGACATTATCAACCGTGC 69385 Query 155892 TGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGA 155945 || | | |||||||||||||||||||| |||||||| |||||||||||||| || Sbjct 69386 TGATTTAGGTATGGAAGTAATGCACGAACGTAACGCGCACAACTTCCCTCTAGA 69439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584830199659040