Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 3e-13 >seq3 Length=1384164 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| ||||| || || || Sbjct 138015 CAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACATTGGATGTCGAGCCCAGCGAT 138074 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||||||||||||||||| || || || ||| || || || Sbjct 138075 ACCATCGAAAATGTGAAGCAAAAGATTCAAGACAAGGAGGGCATTCCCCCCGATCAGCAG 138134 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || ||||| ||||||||| ||||||| ||| | || || | || |||||| | Sbjct 138135 CGCCTAATTTTCGCAGGAAAGCAGCTGGAAGACGGACGCACGCTGTCTGACTACAACATT 138194 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 ||||||||||| || | ||| | || ||| Sbjct 138195 CAGAAAGAGTCAACCTTGCACTTGGTCTTG 138224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181810442817964