Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq25 89.7 5e-13 >seq25 Length=633890 Score = 89.7 bits (98), Expect = 5e-13 Identities = 186/275 (68%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 || |||||||| || || | | | ||||| || || |||||||||||| | | |||| Sbjct 456068 GCCTGGAACCCCGCGGATTTGGGAAAGATGGCCCTGCCGCCGTGTCACATGTTTTGCCAA 456127 Query 142630 TTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGG 142689 ||| |||| | || | || | || || || ||| ||||||||||||| |||||| | Sbjct 456128 TTCTACGTGGCA--GACGGAGAG-CTCTCTTGTCAGATGTATCAGCGTTCCGCAGACATG 456184 Query 142690 TTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACAGCTCATTGCTCGC 142749 | || || |||||||| ||||| || ||||| || | |||| | | |||| Sbjct 456185 GGGTTGGGTGTGCCGTTCAATATTGCCTCTTACGCACTCTTGACACGCTTGGTAGCTCAA 456244 Query 142750 GAATGCGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGGCAATTCGCACATCTACGAT 142809 | || || || || |||||| ||| | ||||| | || || | || | ||| Sbjct 456245 GTCTGTGGCTTGAAAGCCGGAGAGTTCATTCACACGATTGGGGATGCACATGTGTACCTG 456304 Query 142810 ACACACGAAGAAGCTGTGAAAGAACAACTCAGCCG 142844 | || | ||| || ||||||| || |||| ||| Sbjct 456305 AATCATGTAGACGCGCTGAAAGAGCAGCTCACCCG 456339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500494920731840