Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq12 111 1e-19 >seq12 Length=1046732 Score = 111 bits (122), Expect = 1e-19 Identities = 176/247 (71%), Gaps = 9/247 (4%) Strand=Plus/Minus Query 58073 ATCGGCACGCTACAGCTGATTAAAGAACACGGC-TGTAAAGCGGGGCTGGTATTCAACCC 58131 ||||| || || ||| |||| || || || || || ||| | ||| |||| || ||||| Sbjct 826200 ATCGG-ACTCTGCAGTTGATCAA-GAGCAAGGGGTGCAAATCTGGGTTGGTCTTTAACCC 826143 Query 58132 GGCAACGCCGCTCAGTTATCTCG---ATTACGTCATGGACAAACTGGATGTGATCCTGCT 58188 ||| || || ||| | || | | | ||| ||||||| |||| | || |||| Sbjct 826142 GGCCACTCCCCTC---TCCCTGGCACAGCATGTCTTGGACAAGGTGGACATCATTTTGCT 826086 Query 58189 GATGTCCGTGAACCCAGGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACT 58248 |||||||||||||| ||||| || ||||| || ||||||||| ||||| || | ||| | Sbjct 826085 CATGTCCGTGAACCCGGGCTTTGGGGGCCAATCCTTTATTCCGGAGACGTTGAAAAAATT 826026 Query 58249 GCGCGAAGTGCGTCGCCGCATTGATGCGTCCGGTTACGACATTCGCCTGGAAGTGGACGG 58308 | || | ||| || || | | ||| ||||||||||| ||||| |||||||| Sbjct 826025 GAAGGAGGCACGTAAAATGATCGACGAGAGCGGGTACGACATTCGTCTGGAGGTGGACGG 825966 Query 58309 CGGCGTG 58315 ||| ||| Sbjct 825965 CGGTGTG 825959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471237570884320